Set the weapons to PrimaryWeapon and SecondaryWeapon (not w1, w2).
Also, set the warheads to 0% for structures on one and 0% fot the rest on the other (verses for ChronoWarpWH, ChronoBeam).
i.e.
[CWHW]
Verses=100%,100%,100%,100%,100%,100%,0%,0%,0%,100% ,100%,
[CB]
Verses=0%,0%,0%,0%,0%,0%,100%,100%,100%,0%,0%
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